Index

A

add_basis() (in module flake.cluster)

arc_length (flake.string_method.StringPath property)

C

calc_cluster_langevin() (in module flake.cluster) calc_en_gaussian() (in module flake.substrate) calc_en_sin() (in module flake.substrate) calc_en_tanh() (in module flake.substrate) calc_matrices_bvect() (in module flake.substrate)

calc_matrices_square() (in module flake.substrate) calc_matrices_triangle() (in module flake.substrate) cluster_from_params() (in module flake.cluster) cluster_poly() (in module flake.cluster) concat_sweeps() (in module flake.sweep)

D

drift_omega() (in module flake.sweep)

drift_velocity() (in module flake.sweep)

E

evaluate() (flake.string_method.StringPotential method)

F

filter_sweep() (in module flake.sweep) find_mep() (in module flake.string_method) flake.cluster module flake.dynamics module flake.io module flake.maps module

flake.plot module flake.string_method module flake.substrate module flake.sweep module force_sweep() (in module flake.sweep)

G

gaussian() (in module flake.substrate) get_brillouin_zone_2d() (in module flake.plot)

get_ks() (in module flake.substrate) get_poly() (in module flake.cluster) grid_sweep() (in module flake.sweep)

L

last_state() (in module flake.sweep) line_sweep() (in module flake.sweep) load_cluster() (in module flake.cluster) load_map() (in module flake.io)

load_params() (in module flake.io) load_sweep() (in module flake.sweep) load_sweep_points() (in module flake.sweep) load_trajectory() (in module flake.io)

M

make_cluster() (in module flake.cluster) make_sin_params() (in module flake.io) mean_velocity() (in module flake.sweep) module flake.cluster flake.dynamics flake.io flake.maps flake.plot flake.string_method flake.substrate flake.sweep

P

params_from_poscar() (in module flake.cluster) particle_en_gaussian() (in module flake.substrate) particle_en_sin() (in module flake.substrate) particle_en_tanh() (in module flake.substrate)

plot_BZ2d() (in module flake.plot) plot_lattice_vectors() (in module flake.plot) plot_UC() (in module flake.plot) plt_cosmetic() (in module flake.plot)

R

reparametrize() (flake.string_method.StringPath method) rotate() (in module flake.cluster)

rotational_map() (in module flake.maps) rototrasl_map() (in module flake.maps) run_md() (in module flake.dynamics)

S

save_cluster() (in module flake.cluster) save_map() (in module flake.io) save_params() (in module flake.io) save_trajectory() (in module flake.io) save_xyz() (in module flake.cluster)

step() (flake.string_method.StringPath method) StringPath (class in flake.string_method) StringPotential (class in flake.string_method) substrate_from_params() (in module flake.substrate) sweep_md() (in module flake.sweep)

T

translational_map() (in module flake.maps)